Degree Name

Doctor of philosophy


University of Wollongong. School of Earth & Environmental Sciences


Coral reefs are particularly valuable marine ecosystems in terms of biodiversity and socio-economic factors. They are also some of the most vulnerable and threatened of global ecosystems, particularly in view of unprecedented anthropogenic-driven disturbances. Understanding coral reef evolution is not straightforward, as these are complex systems where biological, physical and chemical processes continually interact over a range of spatial and temporal scales. The study of coral reef dynamics at geomorphological scales is very suitable for management as it bridges the temporal and spatial gap between long-term geological and short-term ecological processes. Mapping the geomorphology of coral reefs has provided key information to scientists and managers about the distribution and extent of reef landforms giving insights into calcium carbonate (CaCO3) production and reef growth.

Coral reef coasts present a series of challenges to scientists and managers because they tend to be largely inaccessible, both in that they are isolated and because they are underwater or in intertidal settings where fieldwork is weather and tide dependent. In addition, field surveying rapidly becomes cost-prohibitive as the area of study increases or higher-frequency surveys are needed. Remote sensed data, both from passive and active sensors, together with geospatial analysis techniques, allow addressing the challenges of studying such unique environments at multiple scales and significantly improve the science needed for a sound and efficient management.

Scaling up coral reef CaCO3 production from community metabolism values to regional estimates has been undertaken using remote sensing and geospatial techniques. This approach, although being of great significance for science and management implications, considerably lags behind ecological models of primary production used in terrestrial applications. Furthermore, previous regional studies are geographically constrained and have been based mostly on generalized published metabolic values and coarse mapping.

The research which is the focus of this thesis aims to bridge the gap between detailed and regional geomorphological studies on coral reefs by scaling up CaCO3 production across the Torres Strait region. In order to do so, two reefs in central Torres Strait were selected, namely Sue (Warraber) and Bet (Burrar) reef platforms and detailed investigations about morphology and carbonate production were undertaken. Insights from the local case studies were further used to extrapolate carbonate production estimates across the region based on a reliable geomorphological classification dataset.

The case study reefs were selected as they represent different stages of geomorphological evolution. Sue platform is an emergent reef extending for approximately 12.6 km2, while Bet, immediately to the north of Sue, is a larger reef extending for 27 km2 with a mostly submerged lagoon and very shallow intertidal reef flat. A combination of data collection methods, including multibeam echosounding, RTK-GPS survey and optical remote-sensing derived bathymetry were used to analyse the complex terrain of both reefs. Previous ecological surveys combined with geomorphological mapping were used to scale up CaCO3 production for the complete platforms, including the productive forereef. The CaCO3 production for Sue was estimated to be 19,432 t CaCO3 year-1, averaging a production rate of 1.81 CaCO3 m 2 yr-1. The estimate for Bet platform added to an average 88,167 t CaCO3 year-1, yielding a rate of 3.1 kg CaCO3 m-2 yr-1.

Despite being a northern extension of the Great Barrier Reef (GBR), the geomorphology of coral reefs in Torres Strait remains unexamined at a detailed level. Innovative classification and spatial analysis techniques were used to accurately map the intra-reef geomorphology of reefs, which was used as a basis to extrapolate CaCO3 production and derive a regional carbonate production for Torres Strait. A maximum total of 9.6 million tonnes CaCO3 yr-1 were estimated for the 2,500 km2 analysed region, averaging a value of 4.1 kg CaCO3 m-2 yr-1, almost twice the 2.4 kg CaCO3 m-2 yr-1 productivity rate previously estimated for the GBR.

Overall, the geospatial framework adopted in this study effectively complemented the regional scaling up of CaCO3 production for Torres Strait. Results improve and advance our knowledge of coral reef dynamics at geomorphological scales, which are very relevant for management and adaptation, particularly in regards to the future prospect of corals in a rapid changing climate context.

02Whole.pdf (9014 kB)



Unless otherwise indicated, the views expressed in this thesis are those of the author and do not necessarily represent the views of the University of Wollongong.