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Recycling of single-stranded DNA-binding protein by the bacterial replisome

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posted on 2024-11-16, 05:42 authored by Lisanne SpenkelinkLisanne Spenkelink, Jacob LewisJacob Lewis, Slobodan Jergic, Zhi-Qiang XuZhi-Qiang Xu, Andrew Robinson, Nicholas DixonNicholas Dixon, Antonius van OijenAntonius van Oijen
Single-stranded DNA-binding proteins (SSBs) support DNA replication by protecting single-stranded DNA from nucleolytic attack, preventing intra-strand pairing events and playing many other regulatory roles within the replisome. Recent developments in single-molecule approaches have led to a revised picture of the replisome that is much more complex in how it retains or recycles protein components. Here, we visualize how an in vitro reconstituted Escherichia coli replisome recruits SSB by relying on two different molecular mechanisms. Not only does it recruit new SSB molecules from solution to coat newly formed single-stranded DNA on the lagging strand, but it also internally recycles SSB from one Okazaki fragment to the next. We show that this internal transfer mechanism is balanced against recruitment from solution in a manner that is concentration dependent. By visualizing SSB dynamics in live cells, we show that both internal transfer and external exchange mechanisms are physiologically relevant.

Funding

Under the hood: single-molecule studies of multi-protein machines

Australian Research Council

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Functional Dissection of the Bacterial Replisome

Australian Research Council

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History

Citation

Spenkelink, L. M., Lewis, J. S., Jergic, S., Xu, Z., Robinson, A., Dixon, N. E. & van Oijen, A. M. (2019). Recycling of single-stranded DNA-binding protein by the bacterial replisome. Nucleic Acids Research, 47 (8), 4111-4123.

Journal title

Nucleic Acids Research

Volume

47

Issue

8

Pagination

4111-4123

Language

English

RIS ID

137068

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